Package org.jmol.util
Class BoxInfo
java.lang.Object
org.jmol.util.BoxInfo
The BoxInfo class holds critical information about boundboxes.
These are simple tetragonal spaces lined up with x,y,z.
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Field Summary
FieldsModifier and TypeFieldDescriptionstatic char[]
private final javajs.util.P3
final javajs.util.P3
final javajs.util.P3
private final javajs.util.V3
private final Point3fi[]
The ordering of these vertices is given below.static final byte[]
static final int[][]
private boolean
private float
private static final int[]
static char[]
private static final javajs.util.P3[]
static final javajs.util.P3[]
static final int
static final int
static final int
static final int
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Constructor Summary
Constructors -
Method Summary
Modifier and TypeMethodDescriptionvoid
addBoundBoxPoint
(javajs.util.T3 pt) static void
addPoint
(javajs.util.T3 pt, javajs.util.T3 xyzMin, javajs.util.T3 xyzMax, float margin) static void
addPointXYZ
(float x, float y, float z, javajs.util.P3 xyzMin, javajs.util.P3 xyzMax, float margin) javajs.util.P3
javajs.util.V3
javajs.util.P3[]
getBoundBoxPoints
(boolean isAll) Return basic info on boundbox in the form of an array.Point3fi[]
static final javajs.util.P3[]
getCanonicalCopy
(javajs.util.P3[] boxPoints, float scale) Change points references to canonical form used in Triangulator, while also scaling.float
static final javajs.util.P3[]
getVerticesFromOABC
(javajs.util.T3[] oabc) boolean
isWithin
(javajs.util.P3 pt) void
reset()
static void
scaleBox
(javajs.util.P3[] pts, float scale) void
setBbcage
(float scale) void
setBoundBox
(javajs.util.T3 pt1, javajs.util.T3 pt2, boolean byCorner, float scale) void
setBoundBoxFromOABC
(javajs.util.T3[] points) void
setMargin
(float m) static final javajs.util.P3[]
toOABC
(javajs.util.P3[] bbVertices, javajs.util.T3 offset) Delivers [center a b c] for generation of unit cells from a boundboxtoString()
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Field Details
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X
public static final int X- See Also:
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Y
public static final int Y- See Also:
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Z
public static final int Z- See Also:
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XYZ
public static final int XYZ- See Also:
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bbCorner0
public final javajs.util.P3 bbCorner0 -
bbCorner1
public final javajs.util.P3 bbCorner1 -
bbCenter
private final javajs.util.P3 bbCenter -
bbVector
private final javajs.util.V3 bbVector -
bbVertices
The ordering of these vertices is given below. Do not mess with that. -
isScaleSet
private boolean isScaleSet -
margin
private float margin -
bbcageTickEdges
public static char[] bbcageTickEdges -
uccageTickEdges
public static char[] uccageTickEdges -
edges
public static final byte[] edges -
unitCubePoints
public static final javajs.util.P3[] unitCubePoints -
facePoints
public static final int[][] facePoints -
toCanonical
private static final int[] toCanonical -
unitBboxPoints
private static final javajs.util.P3[] unitBboxPoints
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Constructor Details
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BoxInfo
public BoxInfo()
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Method Details
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reset
public void reset() -
scaleBox
public static void scaleBox(javajs.util.P3[] pts, float scale) -
getVerticesFromOABC
public static final javajs.util.P3[] getVerticesFromOABC(javajs.util.T3[] oabc) - Parameters:
oabc
- [center a b c]- Returns:
- all eight vertices
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getCanonicalCopy
public static final javajs.util.P3[] getCanonicalCopy(javajs.util.P3[] boxPoints, float scale) Change points references to canonical form used in Triangulator, while also scaling. Box Pt to canonical:0 to 0 1 to 3 2 to 4 3 to 7 4 to 1 5 to 2 6 to 5 7 to 6
- Parameters:
boxPoints
-scale
-- Returns:
- canonical P3 array
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toOABC
public static final javajs.util.P3[] toOABC(javajs.util.P3[] bbVertices, javajs.util.T3 offset) Delivers [center a b c] for generation of unit cells from a boundbox- Parameters:
bbVertices
-offset
-- Returns:
- [center a b c]
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getBoundBoxCenter
public javajs.util.P3 getBoundBoxCenter() -
getBoundBoxCornerVector
public javajs.util.V3 getBoundBoxCornerVector() -
getBoundBoxPoints
public javajs.util.P3[] getBoundBoxPoints(boolean isAll) Return basic info on boundbox in the form of an array.- Parameters:
isAll
- to include center and diagonal- Returns:
- isAll: [(0.5 0.5 0.5), diagonal, (0 0 0), (1 1 1)], otherwise just [(0 0 0), (1 1 1)]
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getBoundBoxVertices
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setBoundBoxFromOABC
public void setBoundBoxFromOABC(javajs.util.T3[] points) -
setBoundBox
public void setBoundBox(javajs.util.T3 pt1, javajs.util.T3 pt2, boolean byCorner, float scale) -
setMargin
public void setMargin(float m) -
addBoundBoxPoint
public void addBoundBoxPoint(javajs.util.T3 pt) -
addPoint
public static void addPoint(javajs.util.T3 pt, javajs.util.T3 xyzMin, javajs.util.T3 xyzMax, float margin) -
addPointXYZ
public static void addPointXYZ(float x, float y, float z, javajs.util.P3 xyzMin, javajs.util.P3 xyzMax, float margin) -
setBbcage
public void setBbcage(float scale) -
isWithin
public boolean isWithin(javajs.util.P3 pt) -
getMaxDim
public float getMaxDim() -
toString
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